2017-12-15 11:41:122025-06-01 19:34:57
description
L-arabinose [SW|ABC transporter ](integral membrane protein)
[SW|ABC transporter] for the uptake of -1,5-arabinooligosaccharides, at least up to four L-arabinosyl units (integral membrane protein)
locus
BSU28740
BSU_28740
geneLength
939
942
function
uptake of arabinose
uptake of -1,5-arabinooligosaccharides
product
L-arabinose [SW|ABC transporter] (integral membrane protein)
-1,5-arabinooligosaccharide [SW|ABC transporter] (integral membrane protein)
outlinks
bsu
BSU28740
BSU_28740
Gene
Coordinates
2,940,697 → 2,941,638
2,940,697 2,941,638
The protein
Protein family
MalFG subfamily (according to Swiss-Prot)
[SW|Binding-protein-dependent transport system permease family] (according to UniProt)
[SW|MalFG subfamily] (according to UniProt)
Biological materials
Mutant
MGNA-A986 (araP::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/986 NBRP B. subtilis, Japan]
BKE28740 (Δ[[gene|araP]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE28740 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGAGAACCTCCCCGCTTT, downstream forward: _UP4_GGCTCGTTTAAGGGGGAGGG
BKK28740 (Δ[[gene|araP]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK28740 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGAGAACCTCCCCGCTTT, downstream forward: _UP4_GGCTCGTTTAAGGGGGAGGG
MGNA-A986 (araP::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/986 NBRP B. subtilis, Japan]
BKE28740 ([[gene|araP]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE28740 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGAGAACCTCCCCGCTTT, downstream forward: _UP4_GGCTCGTTTAAGGGGGAGGG
BKK28740 ([[gene|araP]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK28740 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGAGAACCTCCCCGCTTT, downstream forward: _UP4_GGCTCGTTTAAGGGGGAGGG
References
The protein
Paralogous protein(s)
[[this]]
The protein
[SW|Domains]
[SW|ABC transmembrane type-1 domain] (aa 87-302) (according to UniProt)
The protein
Structure
[PDB|2R6G] (from E. coli, 23% identity) [pubmed|18033289]